CIBMTR Reporting Implementation Guide
0.1.6 - Trial Use 1

CIBMTR Reporting Implementation Guide - Local Development build (v0.1.6). See the Directory of published versions

Example Observation: Cytogenetics-Example-1

Generated Narrative: Observation

Resource Observation "Cytogenetics-Example-1"

Profile: CIBMTR Cytogenetics Profile

Security Labels: http://terminology.cibmtr.org/codesystem/transplant-center

status: final

category: Laboratory (Observation Category Codes#laboratory)

code: Genetic variant assessment (LOINC#69548-6)

subject: Patient/PatientExample1 " DOE"

effective: 2022-05-01

method: Fluorescence in situ hybridization (SNOMED CT#426329006)

component

code: Variant ISCN (LOINC#81291-7)

value: 47<2n>,XY,-7,+8,t(9;22)(q34.1;q11.2),i(17)(q10),+der(22)t(9;22)(q34.1;q11.2) (International System for Human Cytogenomic Nomenclature (ISCN)#47<2n>,XY,-7,+8,t(9;22)(q34.1;q11.2),i(17)(q10),+der(22)t(9;22)(q34.1;q11.2))

component

code: Genomic source class (LOINC#48002-0)

value: Somatic (LOINC#LA6684-0)